Sparse matrices

Limited support

armadillo4r, as of v0.5.0, supports the dgCMatrix class from the Matrix package. This class is a sparse matrix class that stores the matrix in a compressed column format.

The strategy for an efficient conversion from R to C++ and vice versa is to create an indexing of the non-zero elements of the input matrix and then use this indexing to create dgCMatrix (R) or SpMat (Armadillo/C++) object.

Note that cpp4r does not provide sparse matrices as it is the case for the dense data types doubles_matrix<> or integers_matrix<>. armadillo4r uses SEXP to provide a method to convert dgCMatrix objects to SpMat objects and vice versa using some properties of S4 objects.

Here is an example of how to convert a dgCMatrix object to a SpMat object and re-import it to R:

[[cpp4r::register]] SEXP sum_matrices_(SEXP x) {
``````cpp
  // Convert from dgCMatrix to SpMat
``````cpp
  SpMat<double> A = as_SpMat(x);
``````cpp

``````cpp
  // Create a matrix B with a diagonal of random numbers
``````cpp
  SpMat<double> B(A.n_rows, A.n_cols);
``````cpp
  for (uword i = 0; i < A.n_rows; ++i) {
``````cpp
    B(i, i) = randu<double>();
``````cpp
  }
``````cpp

``````cpp
  A += B; // Add the two matrices
``````cpp

``````cpp
  // Convert back to dgCMatrix and return
``````cpp
  return as_dgCMatrix(A);
``````cpp
}

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